Protein feature detection
http://edamontology.org/operation_3092
Predict, recognise and identify positional features in proteins from analysing protein sequences or structures.
Synonyms: Protein feature prediction, Protein site detection, Sequence feature detection (protein), Protein site recognition, Sequence profile database search, Protein feature recognition, Protein secondary database search, Protein site prediction
Term info
operations, edam
beta13
Features includes functional sites or regions, secondary structure, structural domains and so on. Methods might use fingerprints, motifs, profiles, hidden Markov models, sequence alignment etc to provide a mapping of a query protein sequence to a discriminatory element. This includes methods that search a secondary protein database (Prosite, Blocks, ProDom, Prints, Pfam etc.) to assign a protein sequence(s) to a known protein family or group.
Term relations
- Prediction and recognition
- Protein sequence analysis
- has topic some Proteins
- has topic some Sequence sites, features and motifs
- has output some Protein features